Use environment variable for installation prefix, use own filename for settings. (81b8fb08) · Commits · CAMS / CSO

config/tutorial/tutorial.rc

+32 −26

Original line number	Diff line number	Diff line
		@@ -28,11 +28,11 @@ cso.tutorial.class : utopya.UtopyaJobTree
		!cso.tutorial.elements : inquire-scihub
		!cso.tutorial.elements : convert
		!cso.tutorial.elements : listing
		cso.tutorial.elements : catalogue
		!cso.tutorial.elements : catalogue
		! ... after running the obs.oper:
		!cso.tutorial.elements : sim-catalogue
		!cso.tutorial.elements : gridded
		!cso.tutorial.elements : gridded-catalogue
		cso.tutorial.elements : gridded-catalogue

		! *

		@@ -42,11 +42,11 @@ cso.tutorial.inquire-scihub.class : utopya.UtopyaJobStep
		cso.tutorial.inquire-scihub.tasks : table plot
		!~ inquire available files:
		cso.tutorial.inquire-scihub.table.class : cso.CSO_SciHub_Inquire
		cso.tutorial.inquire-scihub.table.args : '${PWD}/config/tutorial/tutorial.rc', \
		cso.tutorial.inquire-scihub.table.args : '${__filename__}', \
		rcbase='cso.tutorial.inquire-s5phub-table'
		!~ create plot of available versions:
		cso.tutorial.inquire-scihub.plot.class : cso.CSO_Inquire_Plot
		cso.tutorial.inquire-scihub.plot.args : '${PWD}/config/tutorial/tutorial.rc', \
		cso.tutorial.inquire-scihub.plot.args : '${__filename__}', \
		rcbase='cso.tutorial.inquire-s5phub-plot'

		! *
		@@ -55,7 +55,7 @@ cso.tutorial.inquire-scihub.plot.args : '${PWD}/config/tutorial/tutori
		cso.tutorial.convert.class : utopya.UtopyaJobStep
		! task:
		cso.tutorial.convert.task.class : cso.CSO_S5p_Convert
		cso.tutorial.convert.task.args : '${PWD}/config/tutorial/tutorial.rc', \
		cso.tutorial.convert.task.args : '${__filename__}', \
		rcbase='cso.tutorial.convert'

		! *
		@@ -64,7 +64,7 @@ cso.tutorial.convert.task.args : '${PWD}/config/tutorial/tutori
		cso.tutorial.listing.class : utopya.UtopyaJobStep
		! task:
		cso.tutorial.listing.task.class : cso.CSO_S5p_Listing
		cso.tutorial.listing.task.args : '${PWD}/config/tutorial/tutorial.rc', \
		cso.tutorial.listing.task.args : '${__filename__}', \
		rcbase='cso.tutorial.listing'

		! *
		@@ -75,11 +75,11 @@ cso.tutorial.catalogue.class : utopya.UtopyaJobStep
		cso.tutorial.catalogue.tasks : figs index
		! catalogue creation task:
		cso.tutorial.catalogue.figs.class : cso.CSO_Catalogue
		cso.tutorial.catalogue.figs.args : '${PWD}/config/tutorial/tutorial.rc', \
		cso.tutorial.catalogue.figs.args : '${__filename__}', \
		rcbase='cso.tutorial.catalogue'
		! indexer task:
		cso.tutorial.catalogue.index.class : utopya.Indexer
		cso.tutorial.catalogue.index.args : '${PWD}/config/tutorial/tutorial.rc', \
		cso.tutorial.catalogue.index.args : '${__filename__}', \
		rcbase='cso.tutorial.catalogue-index'

		! *
		@@ -90,11 +90,11 @@ cso.tutorial.sim-catalogue.class : utopya.UtopyaJobStep
		cso.tutorial.sim-catalogue.tasks : figs index
		! catalogue creation task:
		cso.tutorial.sim-catalogue.figs.class : cso.CSO_SimCatalogue
		cso.tutorial.sim-catalogue.figs.args : '${PWD}/config/tutorial/tutorial.rc', \
		cso.tutorial.sim-catalogue.figs.args : '${__filename__}', \
		rcbase='cso.tutorial.sim-catalogue'
		! indexer task:
		cso.tutorial.sim-catalogue.index.class : utopya.Indexer
		cso.tutorial.sim-catalogue.index.args : '${PWD}/config/tutorial/tutorial.rc', \
		cso.tutorial.sim-catalogue.index.args : '${__filename__}', \
		rcbase='cso.tutorial.sim-catalogue-index'

		!
		@@ -105,7 +105,7 @@ cso.tutorial.sim-catalogue.index.args : '${PWD}/config/tutorial/tutori
		cso.tutorial.gridded.class : utopya.UtopyaJobStep
		! catalogue creation task:
		cso.tutorial.gridded.task.class : cso.CSO_GriddedAverage
		cso.tutorial.gridded.task.args : '${PWD}/config/tutorial/tutorial.rc', \
		cso.tutorial.gridded.task.args : '${__filename__}', \
		rcbase='cso.tutorial.gridded'

		! *
		@@ -116,11 +116,11 @@ cso.tutorial.gridded-catalogue.class : utopya.UtopyaJobStep
		cso.tutorial.gridded-catalogue.tasks : figs index
		! catalogue creation task:
		cso.tutorial.gridded-catalogue.figs.class : cso.CSO_GriddedCatalogue
		cso.tutorial.gridded-catalogue.figs.args : '${PWD}/config/tutorial/tutorial.rc', \
		cso.tutorial.gridded-catalogue.figs.args : '${__filename__}', \
		rcbase='cso.tutorial.gridded-catalogue'
		! indexer task:
		cso.tutorial.gridded-catalogue.index.class : utopya.Indexer
		cso.tutorial.gridded-catalogue.index.args : '${PWD}/config/tutorial/tutorial.rc', \
		cso.tutorial.gridded-catalogue.index.args : '${__filename__}', \
		rcbase='cso.tutorial.gridded-catalogue-index'


		@@ -176,8 +176,7 @@ my.attr.institution : CSO
		my.attr.email : Your.Name@cso.org

		! base location for work directories:
		!~ running on ppi:
		my.work : /lustre/storeB/users/${USER}/work/projects/eCSO
		my.work : /Scratch/${USER}/CSO-tutorial


		!----------------------------------------------------------
		@@ -188,7 +187,7 @@ my.work : /lustre/storeB/users/${USER}/work/projects/eC
		*.script.class : utopya.UtopyaJobScriptForeground

		! search path for python modules:
		*.pypath : ${PWD}/py
		*.pypath : ${CSO_PREFIX}/py

		! work directory for jobs;
		*.workdir : ${my.work}/__NAME2PATH__
		@@ -736,7 +735,7 @@ cso.tutorial.sim-catalogue.var.tcc.vmax : 1.0
		!-----------------------------------------------------------

		! target location:
		cso.tutorial.sim-catalogue-index.outdir : ${my.work}/CSO-oper/sim-catalogue
		cso.tutorial.sim-catalogue-index.outdir : ${my.work}/CSO-data-sim-catalogue/S5p/NO2/CAMS

		! title:
		cso.tutorial.sim-catalogue-index.header : CSO catalogue
		@@ -793,8 +792,8 @@ cso.tutorial.gridded.timerange.end : ${my.timerange.end}
		cso.tutorial.gridded.renew : True
		!cso.tutorial.gridded.renew : False

		! keyword used for subdir for resolution and filters:
		my.gridded.subdir : ${my.region}__r01x01__qa08
		! target directory, incl. subdir for resolution and filters:
		my.gridded.dir : ${my.work}/CSO-gridded/${my.region}__r01x01__qa08

		!~

		@@ -847,7 +846,12 @@ cso.tutorial.gridded.filter.quality.units : 1
		! target file, might contain templates:
		! %Y,%m,etc : time values
		! %{basename} : basename (without extension) of first source file
		cso.tutorial.gridded.output.file : ${my.work}/CSO-gridded/${my.gridded.subdir}/%Y/%m/CSO_output_%Y%m%d_%H%M_gridded.nc
		cso.tutorial.gridded.output.file : ${my.gridded.dir}/%Y/%m/CSO_output_%Y%m%d_%H%M_gridded.nc

		! pack variables on output:
		cso.tutorial.gridded.output.packed : True
		! zlib compression level, 0 for no compression:
		cso.tutorial.gridded.output.complevel : 1

		! data variables to be created:
		cso.tutorial.gridded.output.vars : yr ys yr_m ys_m
		@@ -868,23 +872,25 @@ cso.tutorial.gridded.output.ys_m.source : state:ys_m
		! time range:
		cso.tutorial.gridded-catalogue.timerange.start : ${my.timerange.start}
		cso.tutorial.gridded-catalogue.timerange.end : ${my.timerange.end}
		! hourly fields:
		cso.tutorial.gridded-catalogue.timerange.step : hour

		! renew existing files?
		cso.tutorial.gridded-catalogue.renew : True
		!cso.tutorial.gridded-catalogue.renew : False

		! target directory for catalogue:
		cso.tutorial.gridded-catalogue.output.dir : ${my.work}/CSO-gridded/${my.gridded.subdir}/catalogue
		cso.tutorial.gridded-catalogue.output.dir : ${my.gridded.dir}/catalogue

		! input files:
		cso.tutorial.gridded-catalogue.input.file : ../%Y/%m/CSO_output_%Y%m%d_%H%M_gridded.nc
		cso.tutorial.gridded-catalogue.input.file : ${my.gridded.dir}/%Y/%m/CSO_output_%Y%m%d_%H%M_gridded.nc
		!!~ idem for daily average:
		!cso.tutorial.gridded-catalogue.input.file : ../CSO_output_%Y%m%d_aver_gridded.nc
		!cso.tutorial.gridded-catalogue.input.file : ${my.gridded.dir}/CSO_output_%Y%m%d_aver_gridded.nc

		! target files, time tempates and variable name are replaced:
		cso.tutorial.gridded-catalogue.output.file : %Y/%m/%d/S5p_RPRO_NO2_%Y%m%d_%H%M_gridded_%{var}.png
		cso.tutorial.gridded-catalogue.output.file : ${my.gridded.dir}/catalogue/%Y/%m/%d/S5p_RPRO_NO2_%Y%m%d_%H%M_gridded_%{var}.png
		!!~ idem for daily average:
		!cso.tutorial.gridded-catalogue.output.file : %Y/%m/%d/S5p_RPRO_NO2_%Y%m%d_aver_gridded_%{var}.png
		!cso.tutorial.gridded-catalogue.output.file : ${my.gridded.dir}/catalogue/%Y/%m/%d/S5p_RPRO_NO2_%Y%m%d_aver_gridded_%{var}.png

		! figure size (inches), default is (8,6):
		cso.tutorial.gridded-catalogue.figsize : (6,6)
		@@ -931,7 +937,7 @@ cso.tutorial.gridded-catalogue.var.ys_m.vmax : 10.0
		!-----------------------------------------------------------

		! target location:
		cso.tutorial.gridded-catalogue-index.outdir : ${my.work}/CSO-gridded/${my.gridded.subdir}/catalogue
		cso.tutorial.gridded-catalogue-index.outdir : ${my.gridded.dir}/catalogue

		! title:
		cso.tutorial.gridded-catalogue-index.header : CSO catalogue