TNO Intern

Commit 4b6d2499 authored by Arjo Segers's avatar Arjo Segers
Browse files

Support latest servers.

parent 7c80f1ab

oper/launcher

+12 −14
Original line number Diff line number Diff line
@@ -20,7 +20,7 @@ exe='tutorial_oper_S5p.x' 
case `hostname` in



  #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

  # TNO / HPC3:

  # TNO / HPC4:

  app-hpc* )

  #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
@@ -64,20 +64,18 @@ case `hostname` in 
    ;;



  #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

  # MET Norway / Nebula:

  nebula.* )

  # MET Norway / Fahrenheit:

  fahrenheit* )

  #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

    

    # module commands:

    module --force purge

    module load "mpprun/4.0"

    module load "nsc/.1.0"

    module load "buildenv-intel/2018a-eb"

    module load "netCDF/4.4.1.1-HDF5-1.8.19-nsc1-intel-2018a-eb"

    #module load "Python/3.7.0-anaconda-5.3.0-extras-nsc1"

    module purge

    module load "buildenv-intel/2023.1.0-hpc1"

    module load "netCDF-HDF5/4.9.2-1.12.2-hpc1"

    module load "makedepf90/2.8.8"

    

    # machine specific settings:

    MACHINE="metno-nebula"

    MACHINE="metno-fahrenheit"



    ;;
@@ -102,7 +100,7 @@ esac 
cd src



# remove old object files etc:

make clean

#make clean



# replace include file if necessary:

if ( grep '#define _MPI' 'cso.inc' > /dev/null ) ; then
@@ -112,8 +110,8 @@ if ( grep '#define _MPI' 'cso.inc' > /dev/null ) ; then 
EOF

fi



## update dependencies, this requires 'makedepf90'

#make deps

# update dependencies, this requires 'makedepf90'

make deps



# make executable:

make ${exe} MACHINE=${MACHINE}
@@ -131,7 +129,7 @@ echo "" 
echo "run ..."



# cleanup:

make clean

#make clean



# run:

./src/${exe}

oper/launcher-mpi

+44 −23
Original line number Diff line number Diff line
@@ -24,20 +24,16 @@ NPE=4 
case `hostname` in



  #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

  # TNO / HPC3:

  # TNO / HPC4:

  app-hpc* )

  #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

    

    # module commands:

    module purge

    module load "slurm/18.08.8"

    module load "gcc/8.2.0"

    module load "gcc-suite/8.2.0"

    module load "openmpi/4.0.5"

    module load "curl/default"

    module load "openssl/default"

    module load "netcdf-c/4.7.4"

    module load "netcdf-fortran/4.5.3"

    module load "gcc-suite/9.5.0"

    module load "openmpi/4.1.3"

    module load "netcdf-c/4.9.2"

    module load "netcdf-fortran/4.6.1"

    module load "makedepf90"

    

    # machine specific settings:
@@ -46,20 +42,45 @@ case `hostname` in 
    ;;



  #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

  # MET Norway / Nebula:

  nebula.* )

  # MET Norway / PPI:

  ppi-* )

  #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~



    # compiler version and key used in module names:

    export COMPILER_VERSION="intelPE2018" ; compkey="intel2018"

    # modules do not export installation paths ...

    #~ HDF5 libraray:

    export HDF5_VERSION="1.10.5-${compkey}"

    export HDF5_HOME="/modules/centos7/hdf5/${HDF5_VERSION}"

    #~ NetCDF libraray:

    export NETCDF_VERSION="4.7.0-${compkey}"

    export NETCDF_HOME="/modules/centos7/netcdf/${NETCDF_VERSION}"



    # module commands:

    module --force purge

    module load "mpprun/4.0"

    module load "nsc/.1.0"

    module load "buildenv-intel/2018a-eb"

    module load "netCDF/4.4.1.1-HDF5-1.8.19-nsc1-intel-2018a-eb"

    #module load "Python/3.7.0-anaconda-5.3.0-extras-nsc1"

    module load "compiler/${COMPILER_VERSION}"

    module load "hdf5/${HDF5_VERSION}"

    module load "netcdf/${NETCDF_VERSION}"

    module load "makedepf90/default"

    

    # machine specific settings:

    MACHINE="metno-ppi"



    ;;



  #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

  # MET Norway / Fahrenheit:

  fahrenheit* )

  #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

    

    # module commands:

    module purge

    module load "buildenv-intel/2023.1.0-hpc1"

    module load "netCDF-HDF5/4.9.2-1.12.2-hpc1"

    module load "makedepf90/2.8.8"

    

    # machine specific settings:

    MACHINE="metno-nebula"

    MACHINE="metno-fahrenheit"



    ;;
@@ -95,8 +116,8 @@ if ! ( grep '#define _MPI' 'cso.inc' > /dev/null ) ; then 
EOF

fi



## update dependencies:

#make deps

# update dependencies, this requires 'makedepf90'

make deps



# make executable:

make ${exe} MACHINE=${MACHINE} MPI=yes
@@ -122,7 +143,7 @@ jbfile="${jbname}.jb" 
case `hostname` in



  #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

  # TNO / HPC3:

  # TNO / HPC4:

  app-hpc* )

  #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
@@ -161,8 +182,8 @@ EOF 
    ;;



  #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

  # MET Norway / Nebula:

  nebula.* )

  # MET Norway / Fahrenheit:

  fahrenheit* )

  #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~



    # fill:

oper/src/Makefile_config_metno-nebula→oper/src/Makefile_config_metno-fahrenheit

+6 −12
Original line number Diff line number Diff line
@@ -15,7 +15,7 @@ else 
endif



# default flags, similar to what is used in EMEP:

FFLAGS_DEFAULT = -extend-source -fpp -recursive -r8 -convert big_endian -shared-intel -assume noold_maxminloc -ftz

FFLAGS_DEFAULT = -extend-source -recursive -r8



# optimization flags:

FFLAGS_OPTIM   = -O0 -g -traceback -check all -check noarg_temp_created -debug-parameters all -ftrapuv -fpe0
@@ -25,16 +25,10 @@ FFLAGS_OPTIM = -O0 -g -traceback -check all -check noarg_temp_created -debug-p 
FFLAGS  = $(FFLAGS_DEFAULT) $(FFLAGS_OPTIM)

LDFLAGS =



# library:

NETCDF_FORTRAN_HOME = ${EBROOTNETCDF}

NETCDF_FORTRAN_INCS = -I${NETCDF_FORTRAN_HOME}/include

NETCDF_FORTRAN_LIBS = -L${NETCDF_FORTRAN_HOME}/lib -lnetcdff -Wl,-rpath -Wl,${NETCDF_FORTRAN_HOME}/lib



# library:

NETCDF_C_HOME = ${EBROOTNETCDF}

NETCDF_C_INCS =

NETCDF_C_LIBS = -L${NETCDF_C_HOME}/lib -lnetcdf -Wl,-rpath -Wl,${NETCDF_C_HOME}/lib

# single source for NETCDF libs:

NETCDF_INCS = -I${NETCDF_DIR}/include

NETCDF_LIBS = -L${NETCDF_DIR}/lib -lnetcdf -lnetcdff -Wl,-rpath -Wl,${NETCDF_DIR}/lib



# collect:

INCS = $(NETCDF_FORTRAN_INCS) $(NETCDF_C_INCS)

LIBS = $(NETCDF_FORTRAN_LIBS) $(NETCDF_C_LIBS)
 
INCS = $(NETCDF_INCS)

LIBS = $(NETCDF_LIBS)